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LatFit 3286210

Input and runtime details for job 3286210 (precomputed example)

PDB data

? ID of PDB to download and fit1DXS
? Atom to FitCA
? Alternative Atom Identifiernot provided
? Chain identifierA
? Model identifier1

Lattice Model

? Lattice Protein Typeno
? Lattice Type 3D face centered cubic (FCC)
? CA-CA bond length3.8

Method

? Optimization Mode distance RMSD
? Max to keep per iteration100

Job ID 3286210 (server version 4.2.1)

?Job Submitted & Queued@ Mon Jun 13 17:15:10 CEST 2016
?Processing Started@ Mon Jun 13 17:15:25 CEST 2016
?LatFit Finished & Post-Processing@ Mon Jun 13 17:15:25 CEST 2016
?Job Completed@ Mon Jun 13 17:15:26 CEST 2016
 DIRECT ACCESS: http://cpsp.informatik.uni-freiburg.de:80/RetrieveResults.jsp?jobID=3286210&toolName=LatFit ( 30 days expiry )

The job description you specified

backbone example

? Output download complete results [zip]

The lattice protein model was fitted to the original data with a In the following PDB output file of LatFit is visualized, which contains both the original data fitted (chain P in gray) as well as the lattice protein model (chain L in blue). The original PDB file is shown below.
This visualization is created with glmol.

PDB representation of the shown structures

Job resubmission

Use the following button if you want to resubmit the job with altered input or parameterization:
Feeds the job parameters to the input page to resubmit the job.

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Results are computed with LatFit version 1.9.0