LatPack Tools - LatFit

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HPstruct
structure pred.

HPconvert
PDB, CML, ...

HPview
3D visualization

HPdeg
degeneracy

HPnnet
neutral network

HPdesign
seq. design

LatFit
PDB to lattice

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direct access

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FAQ


LatFit:

LatFit calculates a low deviation on-lattice model of a given full atom protein structure in Protein Data Base (PDB) format. It utilizes a greedy distance or coordinate RMSD optimizating approach while successively fitting the structures monomers on the lattice. It supports backbone-only and sidechain-including models within various lattices.
Beneath final deviations and the resulting lattice protein model coordinate data a move string representation is generated.

For more information read here.
Try LatFit using this example

PDB

identifier or file

Lattice

in Angstroms

Method

Output