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HPstruct - Results
HPstruct 2517422

Input and runtime details for job 2517422 (precomputed example)


? Lattice
Unrestricted 3D face centered cubic (FCC)
? Structure Model backbone-only model
? Allow symmetric structuresno
? Number of Structures10
? One representative per equivalence classyes

Job ID 2517422 (server version 4.2.2)

?Job Submitted & Queued@ Mon Jun 13 17:32:37 CEST 2016
?HPstruct Started@ Mon Jun 13 17:32:40 CEST 2016
?HPstruct Finished & Post-Processing@ Mon Jun 13 17:32:40 CEST 2016
?Job Completed@ Mon Jun 13 17:32:41 CEST 2016
 DIRECT ACCESS: http://cpsp.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=2517422&toolName=HPstruct ( 30 days expiry )

Description of the job

backbone example

Exemplifies the prediction of optimal backbone-only lattice protein structures within the FCC lattice that show different placements of their hydrophobic residues, i.e. they are representatives of the according equivalence classes.

? Output download complete results [zip]

List of optimal structures for input sequence PPHHHPHPHHPHPPPPHHHPHPHHPPPPPHHHPP within lattice FCC.

Minimal energy for any structure is -40.

Energy level

Select energy level:

Visualization of structures for selected energy level

This visualization is created with glmol using the color coding 'grey' = H, 'blue' = P, 'yellow' = backbone in side-chain models.

PDB representation of the shown structure Download PDB-File

Job resubmission

Use the following button if you want to resubmit the job with altered input or parameterization:
Feeds the job parameters to the input page to resubmit the job.

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When using HPstruct please cite :

Results are computed with HPstruct version 2.4.6 linking Gecode 1.3.0 and BIU 2.3.6